Welcome to the documentation for ortho_seqs!

Introduction:

This documentation accompanies the ortho_seqs python command line tool that computes multivariate tensor-based orthogonal polynomials based on DNA, RNA or protein sequence data and maps corresponding phenotypic information onto the sequence space.

Guide

• Background & Quickstart
  • ortho_seqs
  • Usage
    • First, install an environment with dependencies for this package:
    • Then, install the package:
    • Gather the input files needed.
    • Then, to run the commandline tool:
    • Flags & Functionality
  • Results & Outputs
  • Results & Outputs
  • To run the GUI (currently in development)
  • Support
  • Roadmap
  • Contribution
  • Authors and acknowledgements
  • License
• Lincense
• Get Further Help
  • Contact

Indices and tables

• Index

• Module Index

• Search Page